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COF-5: structure, synthesis and properties

COF-5 is one of the two first covalent organic frameworks, C₉H₄BO₂: hexahydroxytriphenylene (HHTP) and benzene-1,4-diboronic acid (BDBA) joined by five-membered boronate ester rings into flat honeycomb layers. Reported by Côté, Benin, Ockwig, O’Keeffe, Matzger and Yaghi in Science in 2005, its layers stack eclipsed (P6/mmm), leaving hexagonal channels 27 Å across; it has a surface area of 1,590 m² g⁻¹ and is thermally stable to 500–600 °C.

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COFC₉H₄BO₂HHTP–BDBA COFInteractive 3DEditable figures

COF-5 at a glance

COF-5: key facts, with sources
FormulaC₉H₄BO₂ (Côté et al. 2005)
Formula mass154.9 g mol⁻¹ per C₉H₄BO₂ unit (calculated from the formula)
Building blocksHexahydroxytriphenylene (HHTP, C₁₈H₆(OH)₆) and benzene-1,4-diboronic acid (BDBA, C₆H₄[B(OH)₂]₂) (Côté et al. 2005)
LinkageBoronate ester: a five-membered C₂O₂B ring formed from a catechol and a boronic acid, releasing water
Topologyhcb (honeycomb) layers: HHTP at the corners, BDBA along the edges
StackingEclipsed (AA), space group P6/mmm (Côté et al. 2005)
Unit cellHexagonal, P6/mmm, a ≈ 30.0 Å, c ≈ 3.40 Å: one layer per cell, so the layers are about 3.40 Å apart (from its crystal file)
Pore size27 Å one-dimensional hexagonal channels (Côté et al. 2005; Furukawa & Yaghi 2009)
Surface area1,590 m² g⁻¹ (Côté et al. 2005)
Thermal stabilityStable up to 500–600 °C (Côté et al. 2005)
Gas uptake at 35 barExcess H₂ 36 mg g⁻¹ (77 K); CH₄ 89 mg g⁻¹ and CO₂ 779 mg g⁻¹ (298 K) (Furukawa & Yaghi 2009)
Water stabilityLimited: boronate ester links are chemically sensitive, especially to water (DeBlase et al. 2013)
First reportedCôté, Benin, Ockwig, O’Keeffe, Matzger and Yaghi, Science 310, 1166 (2005)

COF-5 structure diagram

COF-1 and COF-5 figure: BDBA and HHTP building blocks, boroxine and boronate ester rings formed with loss of water, a flat honeycomb COF-5 layer, staggered COF-1 layers, an eclipsed COF-5 stack with 27 Å channels, and surface areas of 711 and 1,590 m² g⁻¹
COF-5 and COF-1: boronic acids condense into boronate ester or boroxine rings, crystallize as honeycomb layers and stack eclipsed (COF-5) or staggered (COF-1). An editable LabCanvas template.

COF-5 crystal structure (high-resolution SVG)

COF-5 crystal structure drawn from its crystal file
COF-5 crystal structure (hexagonal, P6/mmm) from its crystal file in the RASPA2 structure library: boronate ester layers stacked eclipsed, so the hexagonal channels run straight through. Drawn by the LabCanvas figure editor; open it to change the style, cells and view.

COF-5 in 3D (interactive)

COF-5 3D model

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COF-5 in 3D: boronate ester layers stacked eclipsed (AA), the 2.7 nm hexagonal channels shown and the linkages highlighted. Drag to turn it.

COF-5 structure explained

COF-5 is built from two organic molecules. HHTP (2,3,6,7,10,11-hexahydroxytriphenylene) is a flat, triangular molecule with three catechol (1,2-dihydroxy) pairs at its corners. BDBA (benzene-1,4-diboronic acid) is a straight rod with a boronic acid at each end. Each boronic acid reacts with one catechol, losing two water molecules, to close a five-membered boronate ester ring (C₂O₂B).

Every HHTP joins three BDBA and every BDBA joins two HHTP, so each sheet is a honeycomb (hcb): HHTP at the corners of large hexagons, BDBA along their edges. The sheets are flat and made only of boron, carbon, oxygen and hydrogen.

The sheets stack directly on top of one another, eclipsed (AA), in space group P6/mmm, with a hexagonal cell edge of about 30.0 Å and about 3.40 Å between layers (from its crystal file). Because the hexagons line up, they form open one-dimensional channels 27 Å across, which makes COF-5 a mesoporous material.

How COF-5 is made

  1. Condensation. BDBA and HHTP are heated together in an organic solvent mixture in a sealed tube (solvothermal synthesis; Côté et al. 2005).
  2. Self-correction. The B–O bonds form and break while the solid grows, so misplaced building blocks can come off again and the product is crystalline rather than amorphous.
  3. Activation. The powder is washed and the solvent removed from the pores before gas sorption. Boronate esters react with water (DeBlase et al. 2013), so the material is best kept dry.

Why COF-5 matters

Before 2005, organic polymers made of strong covalent bonds were amorphous: errors made during growth stayed in place. COF-1 and COF-5 showed that reversible condensation reactions can give crystalline, permanently porous frameworks “entirely held by strong bonds between B, C, and O atoms” (Côté et al. 2005), extending reticular chemistry from metal–organic frameworks to purely organic ones.

COF-5 in particular showed that the pore size follows from the building blocks: a larger node (HHTP) and an eclipsed stack give 27 Å channels, compared with about 7 Å in COF-1 (Côté et al. 2005). Its hexagonal boronate ester layer became a template for many later 2D COFs with longer linkers.

Uses and research areas

  • Gas storage. COF-5 is one of the reference COFs for hydrogen, methane and carbon dioxide uptake; at 35 bar it takes up more of each than COF-1, but less than the 3D COF-102 (Furukawa & Yaghi 2009).
  • Thin films and electronics. Boronate ester COFs from HHTP have been grown as oriented thin films on single-layer graphene, with improved crystallinity compared with powders (Colson et al. 2011).
  • Teaching and design. Its simple eclipsed honeycomb is the standard picture of a 2D COF and of how the building blocks set the pore size.
  • Limitation. Boronate esters hydrolyse; imine and β-ketoenamine COFs such as TpPa-1 were developed partly to overcome this (DeBlase et al. 2013; Kandambeth et al. 2012).

How to draw the COF-5 structure

For a paper, slide or poster, show three levels: the two building blocks (HHTP and BDBA), the boronate ester ring they form, and the layer or its eclipsed stack with a channel marked. The figure above shows all three and opens as an editable LabCanvas figure. The crystal structure drawing is a high-resolution SVG from the COF-5 crystal file and opens in the LabCanvas figure editor, where you can change the style, the number of cells and the view. The 3D model opens in the LabCanvas 3D Studio, where you can change the number of layers, show the channels and export a high-resolution image.

COF-5 compared with other well-known COFs

COFLinkageBuilding blocksStructureSurface areaFirst report
COF-1Boroxine (B₃O₃)BDBA alone2D, staggered layers711 m² g⁻¹Côté et al., Science 2005
COF-5Boronate esterBDBA + HHTP2D, eclipsed, 27 Å channels1,590 m² g⁻¹Côté et al., Science 2005
COF-102Boroxine (B₃O₃)Tetra(4-dihydroxyborylphenyl)methane3D, ctn net3,472 m² g⁻¹El-Kaderi et al., Science 2007
COF-300ImineTetra-(4-anilyl)methane + terephthaldehyde3D, five interwoven diamond nets, 7.2 Å pores1,360 m² g⁻¹Uribe-Romo et al., JACS 2009
TpPa-1β-KetoenamineTp + p-phenylenediamine2D, stable in acid and boiling water—Kandambeth et al., JACS 2012

Related materials

Frequently asked questions

What is COF-5?

COF-5 is a covalent organic framework made of hexahydroxytriphenylene (HHTP) and benzene-1,4-diboronic acid (BDBA) joined by boronate ester rings into honeycomb layers that stack eclipsed. Reported with COF-1 by the Yaghi group in 2005, it is one of the first two COFs.

What is the chemical formula of COF-5?

C₉H₄BO₂ per formula unit (Côté et al., Science 2005), about 154.9 g/mol.

What is the pore size of COF-5?

About 27 Å (2.7 nm): the hexagons of the eclipsed layers line up into one-dimensional channels of that width, so COF-5 is mesoporous.

What is the surface area of COF-5?

The first report gave 1,590 m²/g (Côté et al., Science 2005).

What is the structure of COF-5?

Flat hexagonal (hcb) layers, HHTP at the corners and BDBA on the edges, stacked eclipsed (AA) in space group P6/mmm, with a cell edge of about 30.0 Å and about 3.40 Å between layers.

How is COF-5 synthesised?

Solvothermally: BDBA and HHTP are heated in an organic solvent mixture in a sealed tube (Côté et al., Science 2005). Water is released as the boronate ester rings close, and the reversible B–O bonds let the solid crystallize.

Is COF-5 stable?

It is thermally stable up to 500–600 °C, but boronate ester links are sensitive to water, so it is kept dry. Imine and β-ketoenamine COFs such as TpPa-1 are used where water or acid is present.

What is the difference between COF-1 and COF-5?

COF-1 is made from BDBA alone and is linked by boroxine (B₃O₃) rings; its layers stack staggered, leaving pores of about 7 Å and 711 m²/g. COF-5 adds HHTP, is linked by boronate esters, stacks eclipsed and has 27 Å channels and 1,590 m²/g.

How can I draw COF-5 for a paper or presentation?

Open the COF-5 figure on this page in LabCanvas (free) to edit the building blocks, linkage and layers, open the crystal structure drawing in the figure editor, or open the 3D model in the LabCanvas 3D Studio and export a render.

References

  1. A. P. Côté, A. I. Benin, N. W. Ockwig, M. O’Keeffe, A. J. Matzger, O. M. Yaghi. Porous, crystalline, covalent organic frameworks. Science 2005, 310, 1166–1170. doi:10.1126/science.1120411
  2. H. Furukawa, O. M. Yaghi. Storage of hydrogen, methane, and carbon dioxide in highly porous covalent organic frameworks for clean energy applications. J. Am. Chem. Soc. 2009, 131, 8875–8883. doi:10.1021/ja9015765
  3. J. W. Colson et al.. Oriented 2D covalent organic framework thin films on single-layer graphene. Science 2011, 332, 228–231. doi:10.1126/science.1202747
  4. C. R. DeBlase, K. E. Silberstein, T.-T. Truong, H. D. Abruña, W. R. Dichtel. β-Ketoenamine-linked covalent organic frameworks capable of pseudocapacitive energy storage. J. Am. Chem. Soc. 2013, 135, 16821–16824. doi:10.1021/ja409421d
  5. H. M. El-Kaderi et al.. Designed synthesis of 3D covalent organic frameworks. Science 2007, 316, 268–272. doi:10.1126/science.1139915
  6. F. J. Uribe-Romo et al.. A crystalline imine-linked 3-D porous covalent organic framework. J. Am. Chem. Soc. 2009, 131, 4570–4571. doi:10.1021/ja8096256
  7. S. Kandambeth et al.. Construction of crystalline 2D covalent organic frameworks with remarkable chemical (acid/base) stability via a combined reversible and irreversible route. J. Am. Chem. Soc. 2012, 134, 19524–19527. doi:10.1021/ja308278w
  8. X. Feng, X. Ding, D. Jiang. Covalent organic frameworks. Chem. Soc. Rev. 2012, 41, 6010–6022. doi:10.1039/C2CS35157A
  9. C. S. Diercks, O. M. Yaghi. The atom, the molecule, and the covalent organic framework. Science 2017, 355, eaal1585. doi:10.1126/science.aal1585

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